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CRI Reading Group on Cancer Systems Biology

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Cancer Research UK Cambridge Research Institute

A reading group to discuss new papers in cancer research with a special focus on genomic techniques and pathway analyses.

Members can be reached by cri-reading-sysbio@lists.cam.ac.uk [you need to be on the list to be able to write to it]

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If you have a question about this list, please contact: . If you have a question about a specific talk, click on that talk to find its organiser.

0 upcoming talks and 25 talks in the archive.

RNA sequencing reveals the role of splicing polymorphisms in regulating human gene expression

UserAna-Teresa Maia (CRI).

HouseRoom 132, CRI.

ClockMonday 24 January 2011, 15:00-16:30

Title to be confirmed

UserAna-Teresa Maia (Cancer Research UK, Cambridge Research Institute).

HouseRoom 132, CRI.

ClockMonday 13 December 2010, 15:00-16:30

A Global Protein Kinase and Phosphatase Interaction Network in Yeast

UserMauro A. Castro (CR-UK Cambridge Research Institute).

HouseRoom 132, CRI.

ClockMonday 22 November 2010, 15:00-16:30

"GREAT improves functional interpretation of cis-regulatory regions"

UserMichael Wilson (Cancer Research UK, Cambridge Research Institute).

HouseRoom 132, CRI.

ClockMonday 08 November 2010, 15:00-16:30

Paper: Polymorphic Cis- and Trans-Regulation of Human Gene Expression

UserKlara Stefflova (Cancer Research UK, Cambridge Research Institute).

HouseRoom 009, CRI.

ClockMonday 25 October 2010, 15:00-16:30

Increased entropy of signal transduction in the cancer metastasis phenotype

UserXin Wang (Cacner Research UK Cambridge Research Institute).

HouseRoom 132, CRI.

ClockMonday 11 October 2010, 15:30-16:30

Binding Site Turnover Produces Pervasive Quantitative Changes in Transcription Factor Binding between Closely Related Drosophila Species

UserKlara Stefflova (Cancer Research UK, Cambridge Research Institute).

HouseRoom 132, CRI.

ClockMonday 26 July 2010, 15:30-16:30

Characterization of the RNA content of chromatin

UserAna-Teresa Maia.

HouseRoom 132, CRI.

ClockMonday 12 July 2010, 15:30-16:30

Human RNA polymerase III transcriptomes and relationships to Pol II promoter chromatin and enhancer-binding factors.

UserClaudia Kutter (Cancer Research UK, Cambridge Research Institute).

HouseRoom 132, CRI.

ClockMonday 28 June 2010, 15:30-16:30

Logic of the Yeast Metabolic Cycle: Temporal Compartmentalization of Cellular Processes.

UserMauro A. Castro (CR-UK Cambridge Research Institute).

HouseRoom 132, CRI.

ClockMonday 14 June 2010, 15:30-16:30

Epistasis in a quantitative trait captured by a molecular model of transcription factor interactions.

UserKerstin Meyer (Cancer Research UK, Cambridge Research Institute).

HouseRoom 132, CRI.

ClockMonday 24 May 2010, 15:30-16:30

A pathway-based classification of human breast cancer

UserYinyin Yuan ( Cambridge Research Institute).

HouseRoom 132, CRI.

ClockMonday 10 May 2010, 15:30-16:30

Noncoding human Y RNAs are overexpressed in tumours and required for cell proliferation

UserStefan Graf.

HouseRoom 132, CRI.

ClockMonday 26 April 2010, 15:30-16:30

SNP arrays in heterogeneous tissue: highly accurate collection of both germline and somatic genetic information from unpaired single tumor samples.

UserOscar Rueda (Cancer Research UK, Cambridge Research Institute).

HouseRoom 132, CRI.

ClockMonday 22 March 2010, 15:30-16:30

Exon Array Analysis of Head and Neck Cancers Identifies a Hypoxia Related Splice Variant of LAMA3 Associated with a Poor Prognosis

UserXin Wang.

HouseRoom 132, CRI.

ClockMonday 08 March 2010, 15:30-16:30

A kernel-based integration of genome=wide data for clinical decision support

UserChristina Curtis.

HouseRoom 132, CRI.

ClockMonday 08 February 2010, 15:30-16:30

Global patterns of cis variation in human cells revealed by high-density allelic expression analysis.

UserAna-Teresa Maia + Roslin Russell.

HouseRoom 132, CRI.

ClockMonday 25 January 2010, 15:30-16:30

DERIVING CHEMOSENSITIVITY FROM CELL LINES: FORENSIC BIOINFORMATICS AND REPRODUCIBLE RESEARCH IN HIGH-THROUGHPUT BIOLOGY

UserFlorian Markowetz.

HouseRoom 132, CRI.

ClockMonday 11 January 2010, 15:30-16:30

Image analysis for automatic cellularity scoring

UserHenrik Failmezger and Raza Ali.

HouseRoom 132, CRI.

ClockMonday 14 December 2009, 15:30-16:30

Close reading of Shen et al, Bioinformatics 2009

UserOscar Rueda (CRUK CRI).

HouseRoom 132, CRI.

ClockMonday 23 November 2009, 15:30-16:30

Discussion of Plaisier et al (2009)

UserMike Fletcher.

HouseRoom 132, CRI.

ClockMonday 09 November 2009, 15:30-16:30

Journal Club on "Reverse engineering the genotype-phenotype map with natural genetic variation."

UserYinyin Yuan.

HouseRoom 132, CRI.

ClockMonday 26 October 2009, 15:30-16:30

Bild et al (Nature 2006) Oncogenic pathway signatures in human cancers as a guide to targeted therapies.

UserFlorian Markowetz.

HouseRoom 132, CRI.

ClockMonday 12 October 2009, 15:30-16:30

Copy number variation, segmentation algorithms, et al

UserOscar Rueda (CRUK CRI).

HouseRoom 132, CRI.

ClockMonday 14 September 2009, 15:00-16:00

Bayesian unsupervised learning with multiple data types

UserRoland Schwarz.

HouseRoom 132, CRI.

ClockMonday 24 August 2009, 15:00-16:00

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