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SUMMARY:Sampling Methods for Exploring Between Subject Variability in Card
 iac Electrophysiology Experiments - Kevin Burrage (Queensland University o
 f Technology)
DTSTART:20160407T100000Z
DTEND:20160407T104500Z
UID:TALK65368@talks.cam.ac.uk
CONTACT:INI IT
DESCRIPTION:Co-authors: C. C. Drovandi (QUT)\, N. Cusimano (QUT)\, S. Psal
 tis (QUT)\, A. N. Pettitt (QUT)\, P. Burrage (QUT)<span><br><span><br>Betw
 een-subject and within-subject variability is ubiquitous in biology and ph
 ysiology and understanding and dealing with this is one of the biggest cha
 llenges in medicine. At the same time it is difficult to investigate this 
 variability by experiments alone. A recent modelling and simulation approa
 ch\, known as population of models (POM)\, allows this exploration to take
  place by building a mathematical model consisting of multiple parameter s
 ets calibrated against experimental data. However\, finding such sets with
 in a high-dimensional parameter space of complex electrophysiological mode
 ls is computationally challenging. By placing the POM approach within a st
 atistical framework\, we develop a novel and efficient algorithm based on 
 sequential Monte Carlo (SMC). We compare the SMC approach with Latin hyper
 cube sampling (LHS)\, a method commonly adopted in the literature for obta
 ining the POM\, in terms of efficiency and output variability in the prese
 nce of a drug block through an in-depth investigation via the Beeler-Reute
 r cardiac electrophysiological model. We show improved efficiency via SMC 
 and that it produces similar responses to LHS when making out-of-sample pr
 edictions in the presence of a simulated drug block.</span></span>
LOCATION:Seminar Room 1\, Newton Institute
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